HIV Target gene Detail Information

> AFG3L1P Gene Search Result

Gene Information

Gene Name	AFG3L1P
Gene ID	172
Gene Alias	AFG3; AFG3L1
Transcripts	ENSG00000223959
Virus	HIV
Gene Type	pseudo
HPA Location Info
HGNC ID	HGNC:314
VEGA ID	OTTHUMG00000138987
OMIM ID	603020
PharmGKB ID	PA24611

Target gene [AFG3L1P] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000466	chr16	227	127	90	444	View
4010297	chr16	9			9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of AFG3L1P expression and immune infiltrating cell level correlation result in HIV+ samples
AFG3L1P expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).