HIV Target gene Detail Information

> ATG4A Gene Search Result

Gene Information

Gene Name	ATG4A
Gene ID	115201
Gene Full Name	autophagy related 4A cysteine peptidase
Gene Alias	APG4A; AUTL2
Transcripts	ENSG00000101844
Virus	HIV
Gene Type	protein coding
HPA Location Info	Microtubules;Actin filaments;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8WYN0
HGNC ID	HGNC:16489
VEGA ID	OTTHUMG00000022176
OMIM ID	300663
String ID	9606.ENSP00000361306
PharmGKB ID	PA25184

Target gene [ATG4A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016459	chrX				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ATG4A expression and immune infiltrating cell level correlation result in HIV+ samples
ATG4A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ATG4A expression and immune infiltrating cell level correlation result in HIV+ samples
ATG4A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).