HBV Target gene Detail Information

> BAIAP2 Gene Search Result


Gene Information
Gene Name BAIAP2
Gene ID 10458
Gene Full Name BAI1 associated protein 2
Gene Alias BAP2; FLAF3; IRSP53
Transcripts ENSG00000175866
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9UQB8
HGNC ID HGNC:947
VEGA ID OTTHUMG00000177698
OMIM ID 605475
String ID 9606.ENSP00000316338
PharmGKB ID PA25251
Target gene [BAIAP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000488 chr17 1247 568 278 2093 View
1000553 chr17 1209 481 217 1907 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of BAIAP2 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
BAIAP2 expression: Low -> High
Lollipop of BAIAP2 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of BAIAP2 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of BAIAP2 expression and immune infiltrating cell level correlation result in HBV+ samples
BAIAP2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).