HIV Target gene Detail Information

> C6orf89 Gene Search Result

Gene Information

Gene Name	C6orf89
Gene ID	221477
Gene Full Name	chromosome 6 open reading frame 89
Gene Alias	BRAP; PS1TP5TP1
Transcripts	ENSG00000198663
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q6UWU4
HGNC ID	HGNC:21114
VEGA ID	OTTHUMG00000014613
OMIM ID	616642
String ID	9606.ENSP00000347322
PharmGKB ID	PA134986915

Target gene [C6orf89] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000080	chr6	103	747	403	1253	View
4014020	chr6		3		3	View
4014021	chr6		3		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of C6orf89 expression and immune infiltrating cell level correlation result in HIV+ samples
C6orf89 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).