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EBV Target gene Detail Information

> CATSPERD Gene Search Result


Gene Information
Gene Name CATSPERD
Gene ID 257062
Gene Full Name cation channel sperm associated auxiliary subunit delta
Gene Alias TMEM146
Transcripts ENSG00000174898
Virus EBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q86XM0
HGNC ID HGNC:28598
VEGA ID OTTHUMG00000143036
OMIM ID 617490
String ID 9606.ENSP00000371037
PharmGKB ID PA144596254
Target gene [CATSPERD] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3001053 chr19 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE85599 (GEO) Infectious mononucleosis 17 Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of CATSPERD expression and immune infiltrating cell level correlation result in EBV+ samples
CATSPERD expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of CATSPERD expression and immune infiltrating cell level correlation result in EBV+ samples
CATSPERD expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of CATSPERD expression and immune infiltrating cell level correlation result in EBV+ samples
CATSPERD expression: Low -> High

> Dataset: GSE85599

HeatMap of cell type fractions in all samples Lollipop of CATSPERD expression and immune infiltrating cell level correlation result in EBV+ samples
CATSPERD expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of CATSPERD expression and immune infiltrating cell level correlation result in EBV+ samples
CATSPERD expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).