HPV Target gene Detail Information

> CCAT1 Gene Search Result

Gene Information

Gene Name	CCAT1
Gene ID	100507056
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:45128
OMIM ID	617705

Target gene [CCAT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001234	chr8	33	9		42	View
5001253	chr8	32	9		41	View
5001254	chr8	32	9		41	View
5001255	chr8	32	9		41	View
5001256	chr8	33	8		41	View
5001309	chr8	31	8		39	View
5001382	chr8	28	8		36	View
5001608	chr8	20	7		27	View
5002069	chr8	15	1		16	View
5002169	chr8	14			14	View
5402875	chr8	15			15	View
5402876	chr8	79	7		86	View
5402877	chr8	19	4		23	View
5402878	chr8	16	1		17	View
5404913	chr8	9			9	View
5404921	chr8	9			9	View
5404922	chr8	9			9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of CCAT1 expression and immune infiltrating cell level correlation result in HPV+ samples
CCAT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).