HTLV1 Target gene Detail Information

> CDH13 Gene Search Result

Gene Information

Gene Name	CDH13
Gene ID	1012
Gene Full Name	cadherin 13
Gene Alias	CDHH; P105
Transcripts	ENSG00000140945
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Plasma membrane;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	P55290
HGNC ID	HGNC:1753
VEGA ID	OTTHUMG00000176635
OMIM ID	601364
String ID	9606.ENSP00000268613
PharmGKB ID	PA26287

Target gene [CDH13] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002406	chr16	125	117	4	246	View
6005848	chr16	79			79	View
6006251	chr16	22	28	22	72	View
6008584	chr16	5	5	34	44	View
6008793	chr16	11	30	1	42	View
6013400	chr16		18	1	19	View
6013832	chr16	12	6		18	View
6013898	chr16	18			18	View
6014936	chr16	8	3	4	15	View
6018587	chr16	9			9	View
6018687	chr16	5	1	3	9	View
6021302	chr16	5	1		6	View
6023699	chr16	2	2		4	View
6024145	chr16	2		2	4	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).