HPV Target gene Detail Information

> CDH4 Gene Search Result

Gene Information

Gene Name	CDH4
Gene ID	1002
Gene Full Name	cadherin 4
Gene Alias	CAD4; RCAD; R-CAD
Transcripts	ENSG00000280641
Virus	HPV
Gene Type	protein coding
HPA Location Info	Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	P55283
HGNC ID	HGNC:1763
VEGA ID	OTTHUMG00000190281
OMIM ID	603006
String ID	9606.ENSP00000484928
PharmGKB ID	PA26300

Target gene [CDH4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5003049	chr20	2	2	2	6	View
5003198	chr20	1	2	2	5	View
5003351	chr20	4			4	View
5003554	chr20	3			3	View
5003555	chr20	2		1	3	View
5003556	chr20	2		1	3	View
5003557	chr20	2		1	3	View
5003558	chr20	2		1	3	View
5003584	chr20	2		1	3	View
5003842	chr20	2			2	View
5003843	chr20	2			2	View
5003844	chr20	2			2	View
5200039	chr20	3	4	1	8	View
5403153	chr20	22	28		50	View
5403178	chr20	74	205	1	280	View
5404711	chr20	4	12		16	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).