HBV Target gene Detail Information

> CDH6 Gene Search Result

Gene Information

Gene Name	CDH6
Gene ID	1004
Gene Full Name	cadherin 6
Gene Alias	CAD6; KCAD
Transcripts	ENSG00000113361
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cell Junctions;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted membrane proteins
Uniport_ID	P55285
HGNC ID	HGNC:1765
VEGA ID	OTTHUMG00000090673
OMIM ID	603007
String ID	9606.ENSP00000265071
PharmGKB ID	PA26302

Target gene [CDH6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005761	chr5	20	13	15	48	View
1014506	chr5	3			3	View
1400925	chr5	20	13	15	48	View
1400926	chr5	3			3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of CDH6 expression and immune infiltrating cell level correlation result in HBV+ samples
CDH6 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).