HIV Target gene Detail Information

> COLGALT2 Gene Search Result

Gene Information

Gene Name	COLGALT2
Gene ID	23127
Gene Full Name	collagen beta(1-O)galactosyltransferase 2
Gene Alias	C1orf17; GLT25D2; ColGalT 2
Transcripts	ENSG00000198756
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8IYK4
HGNC ID	HGNC:16790
VEGA ID	OTTHUMG00000035460
OMIM ID	617533
String ID	9606.ENSP00000354960
PharmGKB ID	PA25606

Target gene [COLGALT2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000472	chr1	392	31	15	438	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).