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EBV Target gene Detail Information

> FCGBP Gene Search Result


Gene Information
Gene Name FCGBP
Gene ID 8857
Gene Full Name Fc fragment of IgG binding protein
Gene Alias FC(GAMMA)BP
Transcripts ENSG00000281123
Virus EBV
Gene Type protein coding
HPA Location Info Plasma membrane;Cytokinetic bridge;Golgi apparatus;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:13572
VEGA ID OTTHUMG00000182580
OMIM ID 617553
String ID 9606.ENSP00000481056
PharmGKB ID PA28059
Target gene [FCGBP] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000369 chr19 1 26 27 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE135644 (GEO) Gastric carcinoma 10 Gastric adenocarcinoma cell line AGS (5), Gastric adenocarcinoma cell line AGS (EBV+)(5)
GSE45919 (GEO) Infectious mononucleosis 24 Infectious mononucleosis (IM)(EBV+)(3), Normal (9), Latent EBV (12)
GSE85599 (GEO) Infectious mononucleosis 17 Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE58240 (GEO) Multiple sclerosis 32 Multiple sclerosis IFN-β treated (EBV+)(16), Multiple sclerosis untreated (EBV+)(16)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE135644

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE45919

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE85599

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE58240

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of FCGBP expression and immune infiltrating cell level correlation result in EBV+ samples
FCGBP expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).