Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV Target gene Detail Information

> FOXJ3 Gene Search Result


Gene Information
Gene Name FOXJ3
Gene ID 22887
Gene Full Name forkhead box J3
Transcripts ENSG00000198815
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear speckles;Nucleoplasm;Vesicles;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9UPW0
HGNC ID HGNC:29178
VEGA ID OTTHUMG00000007026
OMIM ID 616035
String ID 9606.ENSP00000361653
PharmGKB ID PA134945417
Target gene [FOXJ3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001523 chr1 84 27 43 154 View
4001866 chr1 86 32 8 126 View
4001976 chr1 84 16 19 119 View
4002734 chr1 46 30 6 82 View
4003762 chr1 47 8 55 View
4005657 chr1 22 2 6 30 View
4010540 chr1 8 8 View
4015495 chr1 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of FOXJ3 expression and immune infiltrating cell level correlation result in HIV+ samples
FOXJ3 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of FOXJ3 expression and immune infiltrating cell level correlation result in HIV+ samples
FOXJ3 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).