Home
Virus
Gene
Disease
Dataset
Download
Help
 
EBV Target gene Detail Information

> HOXB9 Gene Search Result


Gene Information
Gene Name HOXB9
Gene ID 3219
Gene Full Name homeobox B9
Gene Alias HOX2; HOX2E; HOX-2.5
Transcripts ENSG00000170689
Virus EBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID P17482
HGNC ID HGNC:5120
VEGA ID OTTHUMG00000159907
OMIM ID 142964
String ID 9606.ENSP00000309439
PharmGKB ID PA29396
Target gene [HOXB9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000036 chr17 770 135 78 983 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE135644 (GEO) Gastric carcinoma 10 Gastric adenocarcinoma cell line AGS (5), Gastric adenocarcinoma cell line AGS (EBV+)(5)
GSE45919 (GEO) Infectious mononucleosis 24 Infectious mononucleosis (IM)(EBV+)(3), Normal (9), Latent EBV (12)
GSE85599 (GEO) Infectious mononucleosis 17 Chronic active EBV infection (EBV+)(5), Acute infectious mononucleosis (EBV+)(6), Normal (6)
GSE58240 (GEO) Multiple sclerosis 32 Multiple sclerosis IFN-β treated (EBV+)(16), Multiple sclerosis untreated (EBV+)(16)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE135644

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE45919

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE85599

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE58240

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of HOXB9 expression and immune infiltrating cell level correlation result in EBV+ samples
HOXB9 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).