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HPV Target gene Detail Information

> HSF4 Gene Search Result


Gene Information
Gene Name HSF4
Gene ID 3299
Gene Full Name heat shock transcription factor 4
Gene Alias CTM; CTRCT5
Transcripts ENSG00000102878
Virus HPV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9ULV5
HGNC ID HGNC:5227
VEGA ID OTTHUMG00000178325
OMIM ID 602438
String ID 9606.ENSP00000264009
PharmGKB ID PA29496
Target gene [HSF4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5300301 chr16 14 14 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE40774 (GEO) Head and neck squamous cell carcinoma 134 Head and neck Squamous cell carcinomas GLOTTIC LARYNX (EBV-)(2), Head and neck Squamous cell carcinomas HYPOPHARYNX (EBV-)(9), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV-)(23), Head and neck Squamous cell carcinomas ORAL CAVITY (EBV+)(2), Head and neck Squamous cell carcinomas OROPHARYNX (EBV-)(22), Head and neck Squamous cell carcinomas OROPHARYNX (EBV+)(54), Head and neck Squamous cell carcinomas OTHER (EBV+)(1), Head and neck Squamous cell carcinomas SUBGLOTTIC LARYNX (EBV-)(1), Head and neck Squamous cell carcinomas SUPRAGLOTTIC (EBV-)(19), Squamous cell carcinomas SUPRAGLOTTIC (EBV+)(1)
GSE138080 (GEO) Cervical intraepithelial neoplasia 25 Normal (10), Cervical intraepithelial neoplasia (HPV+)(15)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE40774

HeatMap of cell type fractions in all samples Lollipop of HSF4 expression and immune infiltrating cell level correlation result in HPV+ samples
HSF4 expression: Low -> High

> Dataset: GSE138080

HeatMap of cell type fractions in all samples Lollipop of HSF4 expression and immune infiltrating cell level correlation result in HPV+ samples
HSF4 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of HSF4 expression and immune infiltrating cell level correlation result in HPV+ samples
HSF4 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).