HBV Target gene Detail Information

> IKZF2 Gene Search Result


Gene Information
Gene Name IKZF2
Gene ID 22807
Gene Full Name IKAROS family zinc finger 2
Gene Alias ANF1A2; HELIOS; ZNF1A2; ZNFN1A2
Transcripts ENSG00000030419
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear bodies;Nucleoplasm;Cytosol;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q9UKS7
HGNC ID HGNC:13177
VEGA ID OTTHUMG00000133005
OMIM ID 606234
String ID 9606.ENSP00000412869
PharmGKB ID PA162391927
Target gene [IKZF2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003223 chr2 41 42 72 155 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of IKZF2 expression and immune infiltrating cell level correlation result in HBV+ samples
IKZF2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).