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HTLV1 Target gene Detail Information

> IL1R2 Gene Search Result


Gene Information
Gene Name IL1R2
Gene ID 7850
Gene Full Name interleukin 1 receptor type 2
Gene Alias IL1RB; CD121b; IL1R2c; CDw121b; IL-1R-2; IL-1RT2; IL-1RT-2
Transcripts ENSG00000115590
Virus HTLV1
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, CD markers, Plasma proteins, Predicted membrane proteins, Predicted secreted proteins
Uniport_ID P27930
HGNC ID HGNC:5994
VEGA ID OTTHUMG00000130695
OMIM ID 147811
String ID 9606.ENSP00000330959
PharmGKB ID PA29810
Target gene [IL1R2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002407 chr2 162 72 12 246 View
6008984 chr2 31 9 40 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of IL1R2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
IL1R2 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of IL1R2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
IL1R2 expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of IL1R2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
IL1R2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).