EBV Target gene Detail Information

> INKA2 Gene Search Result


Gene Information
Gene Name INKA2
Gene ID 55924
Gene Full Name inka box actin regulator 2
Gene Alias FAM212B; C1orf183
Transcripts ENSG00000197852
Virus EBV
Gene Type protein coding
HPA Location Info
HGNC ID HGNC:28045
PharmGKB ID PA142672431
Target gene [INKA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000562 chr1 11 11 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of INKA2 expression and immune infiltrating cell level correlation result in EBV+ samples
INKA2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).