HIV Target gene Detail Information

> KDM3A Gene Search Result

Gene Information

Gene Name	KDM3A
Gene ID	55818
Gene Full Name	lysine demethylase 3A
Gene Alias	TSGA; JMJD1; JHDM2A; JHMD2A; JMJD1A
Transcripts	ENSG00000115548
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q9Y4C1
HGNC ID	HGNC:20815
VEGA ID	OTTHUMG00000130204
OMIM ID	611512
String ID	9606.ENSP00000386660
PharmGKB ID	PA164721293

Target gene [KDM3A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4013956	chr2		3		3	View
4015330	chr2	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of KDM3A expression and immune infiltrating cell level correlation result in HIV+ samples
KDM3A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).