HTLV1 Target gene Detail Information

> KIF1C Gene Search Result

Gene Information

Gene Name	KIF1C
Gene ID	10749
Gene Full Name	kinesin family member 1C
Gene Alias	SAX2; LTXS1; SATX2; SPAX2; SPG58
Transcripts	ENSG00000129250
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	O43896
HGNC ID	HGNC:6317
VEGA ID	OTTHUMG00000099451
OMIM ID	603060
String ID	9606.ENSP00000320821
PharmGKB ID	PA30100

Target gene [KIF1C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6007455	chr17	31	15	9	55	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of KIF1C expression and immune infiltrating cell level correlation result in HTLV1+ samples
KIF1C expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of KIF1C expression and immune infiltrating cell level correlation result in HTLV1+ samples
KIF1C expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of KIF1C expression and immune infiltrating cell level correlation result in HTLV1+ samples
KIF1C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).