HPV Target gene Detail Information

> LDB2 Gene Search Result

Gene Information

Gene Name	LDB2
Gene ID	9079
Gene Full Name	LIM domain binding 2
Gene Alias	LDB1; CLIM1; LDB-2
Transcripts	ENSG00000169744
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O43679
HGNC ID	HGNC:6533
VEGA ID	OTTHUMG00000048212
OMIM ID	603450
String ID	9606.ENSP00000306772
PharmGKB ID	PA30317

Target gene [LDB2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000290	chr3	199	130	28	357	View
5001896	chr3	8		12	20	View
5001999	chr3	5	1	12	18	View
5002786	chr3	7	1		8	View
5003292	chr3	3	1		4	View
5402683	chr3	7		11	18	View
5404057	chr4	4	8	4	16	View
5404124	chr4		1		1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).