HPV Target gene Detail Information

> LINC00111 Gene Search Result

Gene Information

Gene Name	LINC00111
Gene ID	54090
Gene Alias	C21orf21; NCRNA00111
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:1262
lncRNASNP2 ID	NONHSAG032914.2
PharmGKB ID	PA164723658

Target gene [LINC00111] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000354	chr21	260	15	4	279	View
5000592	chr21	32	94		126	View
5000613	chr21	29	91		120	View
5001628	chr21	23	3	1	27	View
5001629	chr21	24	3		27	View
5002064	chr21	13	3	1	17	View
5002417	chr21	11	1		12	View
5003224	chr21	2	3		5	View
5004695	chr21				0	View
5402609	chr21				0	View
5402610	chr21	31	95		126	View
5402611	chr21	170	131	39	340	View
5402612	chr21	2	8		10	View
5402613	chr21	261	15	4	280	View
5402614	chr21	5	4		9	View
5402615	chr21	10	8	1	19	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).