HPV Target gene Detail Information

> LINC00393 Gene Search Result

Gene Information

Gene Name	LINC00393
Gene ID	100874156
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:42721
lncRNASNP2 ID	NONHSAG013760.2

Target gene [LINC00393] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000402	chr13	29	6	196	231	View
5000795	chr13	80	1	2	83	View
5001978	chr13	17		1	18	View
5002085	chr13	16			16	View
5002357	chr13	12			12	View
5402903	chr13	28	7	2	37	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).