HPV Target gene Detail Information

> LINC00399 Gene Search Result

Gene Information

Gene Name	LINC00399
Gene ID	104326054
Gene Full Name	long intergenic non-protein coding RNA 399
Gene Alias	TCONS_00021596
Transcripts	ENSG00000229792
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:42728
lncRNASNP2 ID	NONHSAG014154.2

Target gene [LINC00399] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5404086	chr13	64	16	1	81	View
5404087	chr13	64	21	1	86	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).