HPV Target gene Detail Information

> LINC01309 Gene Search Result

Gene Information

Gene Name	LINC01309
Gene ID	104326190
Gene Alias	TCONS_l2_00007459
Virus	HPV
Gene Type	ncRNA
HGNC ID	HGNC:50497
lncRNASNP2 ID	NONHSAG014116.2

Target gene [LINC01309] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5200592	chr13	5	12	1	18	View
5201485	chr13	9		1	10	View
5403125	chr13	4			4	View
5403184	chr13				0	View
5403216	chr13		4		4	View
5403217	chr13	317	45	171	533	View
5404650	chr13	1	1		2	View
5404686	chr13	1		1	2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).