HPV Target gene Detail Information

> LINGO2 Gene Search Result

Gene Information

Gene Name	LINGO2
Gene ID	158038
Gene Full Name	leucine rich repeat and Ig domain containing 2
Gene Alias	LERN3; LRRN6C
Transcripts	ENSG00000174482
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q7L985
HGNC ID	HGNC:21207
VEGA ID	OTTHUMG00000019721
OMIM ID	609793
String ID	9606.ENSP00000369328
PharmGKB ID	PA162394096

Target gene [LINGO2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001576	chr9	8	6	14	28	View
5002480	chr9	3		8	11	View
5002866	chr9	5	1	1	7	View
5200070	chr9	1		6	7	View
5200304	chr9	137	19	36	192	View
5200952	chr9				0	View
5201039	chr9				0	View
5201859	chr9		4		4	View
5401767	chr9		2	11	13	View
5403412	chr9	10	10		20	View
5404438	chr9	2	4	5	11	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).