HBV Target gene Detail Information

> LRRCC1 Gene Search Result

Gene Information

Gene Name	LRRCC1
Gene ID	85444
Gene Full Name	leucine rich repeat and coiled-coil centrosomal protein 1
Gene Alias	SAP2; VFL1; CLERC; CLERK
Transcripts	ENSG00000133739
Virus	HBV
Gene Type	protein coding
HPA Location Info	Centrosome;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9C099
HGNC ID	HGNC:29373
VEGA ID	OTTHUMG00000164784
OMIM ID	617791
String ID	9606.ENSP00000353538
PharmGKB ID	PA142671519

Target gene [LRRCC1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1017328	chr8	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of LRRCC1 expression and immune infiltrating cell level correlation result in HBV+ samples
LRRCC1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).