HTLV1 Target gene Detail Information

> LSM4 Gene Search Result

Gene Information

Gene Name	LSM4
Gene ID	25804
Gene Full Name	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Alias	GRP; YER112W
Transcripts	ENSG00000130520
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9Y4Z0
HGNC ID	HGNC:17259
VEGA ID	OTTHUMG00000183357
OMIM ID	607284
String ID	9606.ENSP00000469468
PharmGKB ID	PA134906569

Target gene [LSM4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6004994	chr19	75	15	9	99	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).