HTLV1 Target gene Detail Information

> LSM5 Gene Search Result

Gene Information

Gene Name	LSM5
Gene ID	23658
Gene Full Name	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Alias	YER146W
Transcripts	ENSG00000106355
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9Y4Y9
HGNC ID	HGNC:17162
VEGA ID	OTTHUMG00000022913
OMIM ID	607285
String ID	9606.ENSP00000410758
PharmGKB ID	PA134881171

Target gene [LSM5] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6030392	chr7				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).