HBV Target gene Detail Information

> MACROD2 Gene Search Result


Gene Information
Gene Name MACROD2
Gene ID 140733
Gene Full Name MACRO domain containing 2
Gene Alias C2orf133; C20orf133
Transcripts ENSG00000172264
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A1Z1Q3
HGNC ID HGNC:16126
VEGA ID OTTHUMG00000031919
OMIM ID 611567
String ID 9606.ENSP00000217246
PharmGKB ID PA162394843
Target gene [MACROD2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002028 chr20 277 60 32 369 View
1002667 chr20 204 13 9 226 View
1003990 chr20 15 56 27 98 View
1005114 chr20 61 61 View
1008878 chr20 10 4 5 19 View
1010711 chr20 8 3 11 View
1012317 chr20 2 1 4 7 View
1012318 chr20 2 1 4 7 View
1013403 chr20 4 1 5 View
1013479 chr20 3 2 5 View
1015403 chr20 2 2 View
1015404 chr20 2 2 View
1017373 chr20 1 1 View
1404668 chr20 13 15 36 64 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MACROD2 expression and immune infiltrating cell level correlation result in HBV+ samples
MACROD2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).