EBV Target gene Detail Information

> MALRD1 Gene Search Result


Gene Information
Gene Name MALRD1
Gene ID 340895
Gene Full Name MAM and LDL receptor class A domain containing 1
Gene Alias DIET1; C10orf112; bA265G8.2
Transcripts ENSG00000204740
Virus EBV
Gene Type protein coding
HPA Location Info Golgi apparatus;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VYJ5
HGNC ID HGNC:24331
VEGA ID OTTHUMG00000017779
OMIM ID 617715
String ID 9606.ENSP00000412763
PharmGKB ID PA134958320
Target gene [MALRD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000788 chr10 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of MALRD1 expression and immune infiltrating cell level correlation result in EBV+ samples
MALRD1 expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of MALRD1 expression and immune infiltrating cell level correlation result in EBV+ samples
MALRD1 expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of MALRD1 expression and immune infiltrating cell level correlation result in EBV+ samples
MALRD1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).