HBV Target gene Detail Information

> MB Gene Search Result


Gene Information
Gene Name MB
Gene ID 4151
Gene Full Name myoglobin
Gene Alias PVALB; myoglobgin
Transcripts ENSG00000198125
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Candidate cardiovascular disease genes, Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID P02144
HGNC ID HGNC:6915
VEGA ID OTTHUMG00000150606
OMIM ID 160000
String ID 9606.ENSP00000380489
Drugbank ID BE0004467
PharmGKB ID PA30658
Target gene [MB] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003166 chr22 148 10 1 159 View
1010177 chr14 13 13 View
1015082 chr17 3 3 View
1400388 chr5 41 662 181 884 View
1404036 chr22 148 10 1 159 View
1404463 chr14 1 1 View
1404562 chr5 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of MB expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
MB expression: Low -> High
Lollipop of MB expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of MB expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MB expression and immune infiltrating cell level correlation result in HBV+ samples
MB expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).