HPV Target gene Detail Information

> MIR1275 Gene Search Result

Gene Information

Gene Name	MIR1275
Gene ID	100302123
Gene Full Name	microRNA 1275
Gene Alias	MIRN1275; mir-1275; hsa-mir-1275
Transcripts	ENSG00000221697
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:35346
Rfam ID	RF02022
PharmGKB ID	PA164722422
miRBase ID	MI0006415
miRBase Name	hsa-mir-1275

Target gene [MIR1275] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5404091	chr6	44	46	65	155	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)
GSE65858 (GEO)	Head and neck squamous cell carcinoma	270	Head and neck squamous cell carcinoma (EBV+)(73), Head and neck squamous cell carcinoma (EBV-)(197)
GSE51993 (GEO)	Cervical intraepithelial neoplasia	24	Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of MIR1275 expression and immune infiltrating cell level correlation result in HPV+ samples
MIR1275 expression: Low -> High

> Dataset: GSE65858
HeatMap of cell type fractions in all samples	Lollipop of MIR1275 expression and immune infiltrating cell level correlation result in HPV+ samples
MIR1275 expression: Low -> High

> Dataset: GSE51993
HeatMap of cell type fractions in all samples	Lollipop of MIR1275 expression and immune infiltrating cell level correlation result in HPV+ samples
MIR1275 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).