HIV Target gene Detail Information

> MYSM1 Gene Search Result

Gene Information

Gene Name	MYSM1
Gene ID	114803
Gene Full Name	Myb like, SWIRM and MPN domains 1
Gene Alias	2ADUB; BMFS4; 2A-DUB
Transcripts	ENSG00000162601
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nucleoli;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q5VVJ2
HGNC ID	HGNC:29401
VEGA ID	OTTHUMG00000009533
OMIM ID	612176
String ID	9606.ENSP00000418734
PharmGKB ID	PA142671301

Target gene [MYSM1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003447	chr1	32	29		61	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MYSM1 expression and immune infiltrating cell level correlation result in HIV+ samples
MYSM1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).