HPV Target gene Detail Information

> NR5A1 Gene Search Result


Gene Information
Gene Name NR5A1
Gene ID 2516
Gene Full Name nuclear receptor subfamily 5 group A member 1
Gene Alias ELP; SF1; FTZ1; POF7; SF-1; AD4BP; FTZF1; SPGF8; SRXX4; SRXY3; hSF-1
Transcripts ENSG00000136931
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Disease related genes, Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID Q13285
HGNC ID HGNC:7983
VEGA ID OTTHUMG00000020655
OMIM ID 184757
String ID 9606.ENSP00000362690
Drugbank ID BE0003359
PharmGKB ID PA31764
Target gene [NR5A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5300412 chr9 5 8 13 View
5300413 chr9 4 8 12 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of NR5A1 expression and immune infiltrating cell level correlation result in HPV+ samples
NR5A1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).