Home
Virus
Gene
Disease
Dataset
Download
Help
 
HPV Target gene Detail Information

> POU5F1B Gene Search Result


Gene Information
Gene Name POU5F1B
Gene ID 5462
Gene Full Name POU class 5 homeobox 1B
Gene Alias OTF3C; OTF3P1; OCT4PG1; OCT4-PG1; POU5F1P1; POU5F1P4; POU5FLC8; POU5FLC20
Transcripts ENSG00000212993
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q06416
HGNC ID HGNC:9223
VEGA ID OTTHUMG00000157807
OMIM ID 615739
String ID 9606.ENSP00000419298
PharmGKB ID PA33547
Target gene [POU5F1B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000779 chr8 79 7 86 View
5001014 chr8 59 59 View
5001023 chr8 57 1 58 View
5001024 chr8 57 1 58 View
5001033 chr8 57 57 View
5001034 chr8 56 1 57 View
5001147 chr8 37 10 47 View
5001148 chr8 37 10 47 View
5001190 chr8 35 9 44 View
5001208 chr8 35 8 43 View
5001316 chr8 31 8 39 View
5001369 chr8 7 17 13 37 View
5001412 chr8 23 12 35 View
5001585 chr8 26 1 27 View
5001738 chr8 19 5 24 View
5001777 chr8 19 4 23 View
5001942 chr8 18 1 19 View
5001943 chr8 18 1 19 View
5001951 chr8 13 6 19 View
5002100 chr8 15 1 16 View
5002101 chr8 11 4 1 16 View
5002102 chr8 15 1 16 View
5003855 chr8 1 1 2 View
5003858 chr8 2 2 View
5003859 chr8 1 1 2 View
5004208 chr8 1 1 View
5004212 chr8 1 1 View
5100001 chr8 2674 3617 1541 7832 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of POU5F1B expression and immune infiltrating cell level correlation result in HPV+ samples
POU5F1B expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of POU5F1B expression and immune infiltrating cell level correlation result in HPV+ samples
POU5F1B expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).