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HPV Target gene Detail Information

> PROX1 Gene Search Result


Gene Information
Gene Name PROX1
Gene ID 5629
Gene Full Name prospero homeobox 1
Transcripts ENSG00000117707
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q92786
HGNC ID HGNC:9459
VEGA ID OTTHUMG00000036946
OMIM ID 601546
String ID 9606.ENSP00000355925
PharmGKB ID PA33812
Target gene [PROX1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000050 chr1 3624 2491 1281 7396 View
5000052 chr1 3679 2585 1312 7576 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE65858 (GEO) Head and neck squamous cell carcinoma 270 Head and neck squamous cell carcinoma (EBV+)(73), Head and neck squamous cell carcinoma (EBV-)(197)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: GSE65858

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of PROX1 expression and immune infiltrating cell level correlation result in HPV+ samples
PROX1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).