Home
Virus
Gene
Disease
Dataset
Download
Help
 
HPV Target gene Detail Information

> PRR20B Gene Search Result


Gene Information
Gene Name PRR20B
Gene ID 729233
Gene Full Name proline rich 20B
Gene Alias PRR20; PRR20A; PRR20C; PRR20D; PRR20E
Transcripts ENSG00000204918
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P86481
HGNC ID HGNC:37220
VEGA ID OTTHUMG00000184243
String ID 9606.ENSP00000367163
PharmGKB ID PA165505352
Target gene [PRR20B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200210 chr13 1 1 View
5403251 chr13 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of PRR20B expression and immune infiltrating cell level correlation result in HPV+ samples
PRR20B expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).