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HIV Target gene Detail Information

> RAB14 Gene Search Result


Gene Information
Gene Name RAB14
Gene ID 51552
Gene Full Name RAB14, member RAS oncogene family
Gene Alias FBP; RAB-14
Transcripts ENSG00000119396
Virus HIV
Gene Type protein coding
HPA Location Info Vesicles;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P61106
HGNC ID HGNC:16524
VEGA ID OTTHUMG00000020582
OMIM ID 612673
String ID 9606.ENSP00000362946
PharmGKB ID PA34104
Target gene [RAB14] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003163 chr9 56 11 1 68 View
4003276 chr9 53 11 1 65 View
4006964 chr9 21 21 View
4009606 chr9 11 11 View
4013228 chr9 2 2 4 View
4014045 chr9 1 1 2 View
4014046 chr9 1 1 2 View
4014566 chr9 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RAB14 expression and immune infiltrating cell level correlation result in HIV+ samples
RAB14 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of RAB14 expression and immune infiltrating cell level correlation result in HIV+ samples
RAB14 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).