HPV Target gene Detail Information

> RARA Gene Search Result

Gene Information

Gene Name	RARA
Gene ID	5914
Gene Full Name	retinoic acid receptor alpha
Gene Alias	RAR; NR1B1
Transcripts	ENSG00000131759
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Actin filaments;Cytosol;Nucleoli;
HPA Protein Class Info	Cancer-related genes, Disease related genes, FDA approved drug targets, Nuclear receptors, Plasma proteins, Predicted intracellular proteins, Transcription factors
Gene Function	Oncogene
Uniport_ID	P10276
HGNC ID	HGNC:9864
VEGA ID	OTTHUMG00000133328
OMIM ID	180240
String ID	9606.ENSP00000254066
Drugbank ID	BE0000663
Drug (Cytoscape Annotation)	Bexarotene
PharmGKB ID	PA34225

Target gene [RARA] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000041	chr17	3263	4258	1544	9065	View
5000728	chr17	78	14	2	94	View
5000735	chr17	78	13	2	93	View
5000816	chr17	73	7		80	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).