HPV Target gene Detail Information

> RTN4RL1 Gene Search Result

Gene Information

Gene Name	RTN4RL1
Gene ID	146760
Gene Full Name	reticulon 4 receptor like 1
Gene Alias	NgR3; NGRH2
Transcripts	ENSG00000185924
Virus	HPV
Gene Type	protein coding
HPA Location Info	Actin filaments;Midbody;Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86UN2
HGNC ID	HGNC:21329
VEGA ID	OTTHUMG00000180184
OMIM ID	610461
String ID	9606.ENSP00000330631
PharmGKB ID	PA134973992

Target gene [RTN4RL1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5000249	chr17	97	245	96	438	View
5000320	chr17	75	120	113	308	View
5000543	chr17	125	8	8	141	View
5000571	chr17	118	8	6	132	View
5000576	chr17	117	8	4	129	View
5001265	chr17	11	30		41	View
5001532	chr17	27	2		29	View
5001563	chr17	26	2		28	View
5001710	chr17	11	13		24	View
5001956	chr17	11	7		18	View
5002072	chr17	9	7		16	View
5002174	chr17	7	7		14	View
5002321	chr17	8	1	3	12	View
5002619	chr17	7	1	1	9	View
5002706	chr17	6	1	1	8	View
5002818	chr17	7			7	View
5003417	chr17	2	1		3	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).