HBV Target gene Detail Information

> SCARF2 Gene Search Result

Gene Information

Gene Name	SCARF2
Gene ID	91179
Gene Full Name	scavenger receptor class F member 2
Gene Alias	NSR1; SREC2; VDEGS; SREC-II; SRECRP-1
Transcripts	ENSG00000244486
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Nuclear bodies;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted membrane proteins
Uniport_ID	Q96GP6
HGNC ID	HGNC:19869
VEGA ID	OTTHUMG00000150779
OMIM ID	613619
String ID	9606.ENSP00000477564
PharmGKB ID	PA134908523

Target gene [SCARF2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1404574	chr22	3	3	1	7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SCARF2 expression and immune infiltrating cell level correlation result in HBV+ samples
SCARF2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).