HPV Target gene Detail Information

> SDC1 Gene Search Result

Gene Information

Gene Name	SDC1
Gene ID	6382
Gene Full Name	syndecan 1
Gene Alias	SDC; CD138; SYND1; syndecan
Transcripts	ENSG00000115884
Virus	HPV
Gene Type	protein coding
HPA Location Info	Focal adhesion sites;Predicted to be secreted;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Cancer-related genes, CD markers, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins, Transporters
Uniport_ID	P18827
HGNC ID	HGNC:10658
VEGA ID	OTTHUMG00000090751
OMIM ID	186355
String ID	9606.ENSP00000370542
PharmGKB ID	PA35588

Target gene [SDC1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5404028	chr2	62	105	33	200	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).