HTLV1 Target gene Detail Information

> SEPTIN9 Gene Search Result


Gene Information
Gene Name SEPTIN9
Gene ID 10801
Gene Alias MSF; MSF1; NAPB; SEPT9; SINT1; PNUTL4; SeptD1; AF17q25
Transcripts ENSG00000184640
Virus HTLV1
Gene Type protein coding
HPA Location Info
Gene Function Oncogene
HGNC ID HGNC:7323
OMIM ID 604061
PharmGKB ID PA31132
Target gene [SEPTIN9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003354 chr17 162 3 165 View
6007369 chr17 28 11 17 56 View
6008155 chr17 47 1 48 View
6009472 chr17 37 37 View
6010343 chr17 16 15 31 View
6011763 chr17 15 6 4 25 View
6013105 chr17 2 15 3 20 View
6100189 chr17 75 30 1 106 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of SEPTIN9 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SEPTIN9 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).