HIV Target gene Detail Information

> SHOC2 Gene Search Result

Gene Information

Gene Name	SHOC2
Gene ID	8036
Gene Full Name	SHOC2, leucine rich repeat scaffold protein
Gene Alias	SOC2; SUR8; SIAA0862
Transcripts	ENSG00000108061
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins, RAS pathway related proteins
Uniport_ID	Q9UQ13
HGNC ID	HGNC:15454
VEGA ID	OTTHUMG00000019047
OMIM ID	602775
String ID	9606.ENSP00000358464
PharmGKB ID	PA37960

Target gene [SHOC2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003165	chr10	50	19		69	View
4007490	chr10	10	6	3	19	View
4011972	chr10	4	2		6	View
4012561	chr10	2	3		5	View
4014841	chr10	2			2	View
4016479	chr10				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).