HBV Target gene Detail Information

> SLC28A1 Gene Search Result

Gene Information

Gene Name	SLC28A1
Gene ID	9154
Gene Full Name	solute carrier family 28 member 1
Gene Alias	CNT1; HCNT1
Transcripts	ENSG00000156222
Virus	HBV
Gene Type	protein coding
HPA Location Info	Plasma membrane;Cytosol;Nuclear speckles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	O00337
HGNC ID	HGNC:11001
VEGA ID	OTTHUMG00000148668
OMIM ID	606207
String ID	9606.ENSP00000378074
Drugbank ID	BE0004705
PharmGKB ID	PA387

Target gene [SLC28A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006485	chr15	37	1		38	View
1012398	chr15	5	2		7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SLC28A1 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC28A1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).