HTLV1 Target gene Detail Information

> SLC35F4 Gene Search Result

Gene Information

Gene Name	SLC35F4
Gene ID	341880
Gene Full Name	solute carrier family 35 member F4
Gene Alias	C14orf36; c14_5373
Transcripts	ENSG00000151812
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoli fibrillar center;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	A4IF30
HGNC ID	HGNC:19845
VEGA ID	OTTHUMG00000171317
String ID	9606.ENSP00000342518
PharmGKB ID	PA134959551

Target gene [SLC35F4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6010185	chr14	8	21	3	32	View
6011029	chr14	17	11		28	View
6012895	chr14	9	5	7	21	View
6012896	chr14	9	5	7	21	View
6022981	chr14		2	2	4	View
6025084	chr14		2	1	3	View
6027384	chr14	2			2	View
6028509	chr14		1		1	View
6031667	chr14				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of SLC35F4 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SLC35F4 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of SLC35F4 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SLC35F4 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of SLC35F4 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SLC35F4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).