HTLV1 Target gene Detail Information

> SMARCA2 Gene Search Result

Gene Information

Gene Name	SMARCA2
Gene ID	6595
Gene Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Gene Alias	BRM; SNF2; SWI2; hBRM; NCBRS; Sth1p; BAF190; SNF2L2; SNF2LA; hSNF2a
Transcripts	ENSG00000080503
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;Intermediate filaments;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	P51531
HGNC ID	HGNC:11098
VEGA ID	OTTHUMG00000019445
OMIM ID	600014
String ID	9606.ENSP00000265773
PharmGKB ID	PA35948

Target gene [SMARCA2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001847	chr9	308	23	4	335	View
6008780	chr9	40	2		42	View
6010796	chr9	5	9	15	29	View
6015483	chr9		10	4	14	View
6020149	chr9	6	1		7	View
6025054	chr9	2	1		3	View
6026343	chr9	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).