HPV Target gene Detail Information

> SMCHD1 Gene Search Result

Gene Information

Gene Name	SMCHD1
Gene ID	23347
Gene Full Name	structural maintenance of chromosomes flexible hinge domain containing 1
Gene Alias	BAMS; FSHD2
Transcripts	ENSG00000101596
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nuclear bodies;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	A6NHR9
HGNC ID	HGNC:29090
VEGA ID	OTTHUMG00000178235
OMIM ID	614982
String ID	9606.ENSP00000326603
PharmGKB ID	PA128395776

Target gene [SMCHD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5403702	chr18	13	1		14	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).