HBV Target gene Detail Information

> SNRK Gene Search Result

Gene Information

Gene Name	SNRK
Gene ID	54861
Gene Full Name	SNF related kinase
Gene Alias	HSNFRK
Transcripts	ENSG00000163788
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cell Junctions;Plasma membrane;Vesicles;Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9NRH2
HGNC ID	HGNC:30598
VEGA ID	OTTHUMG00000156491
OMIM ID	612760
String ID	9606.ENSP00000296088
Drugbank ID	BE0009493; BE0009539
PharmGKB ID	PA142670894

Target gene [SNRK] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1010512	chr3	7	5		12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE114783 (GEO)	Chronic HBV (CHB) infection	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Hepatocellular carcinoma	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Liver cirrhosis	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783
HeatMap of cell type fractions in all samples	Lollipop of SNRK expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
SNRK expression: Low -> High
Lollipop of SNRK expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples	Lollipop of SNRK expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples


> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SNRK expression and immune infiltrating cell level correlation result in HBV+ samples
SNRK expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).