HPV Target gene Detail Information

> SOX2-OT Gene Search Result

Gene Information

Gene Name	SOX2-OT
Gene ID	347689
Gene Alias	SOX2OT; NCRNA00043
Transcripts	ENSG00000242808
Virus	HPV
Gene Type	ncRNA
HPA Location Info
HGNC ID	HGNC:20209
VEGA ID	OTTHUMG00000158186
OMIM ID	616338
lncRNASNP2 ID	NONHSAG036783.2
PharmGKB ID	PA134874116

Target gene [SOX2-OT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5002870	chr3	5	2		7	View
5004458	chr3				0	View
5200145	chr3		2		2	View
5200341	chr3	9			9	View
5201225	chr3	8			8	View
5400882	chr3	15			15	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).